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Martin Asser Hansen edited this page Oct 2, 2015 · 5 revisions

Biopiece: biostat

Description

You can monitor the status of all Biopieces running using biostat. The status will refresh every 5 seconds (default).

USER    PID     %CPU    %MEM    TMP_DIR START TIME              RUN TIME        COMMAND
maasha  896     0.0     0.1     309M    2009-06-17 13:11:39     04:22:35        blat_seq -g hg18
maasha  897     0.0     0.1     N/A     2009-06-17 13:11:39     04:22:35        write_psl -Zxo blat.psl.gz

Press ctrl-c to quit.

Usage

biostat [options]

Options

[-t <uint>   | --time=<uint>]    #  Timeout in seconds between status updates  - Default=5
[-s <string> | --sort=<string>]  #  Sort status list on a specified column     - Default=%CPU
[-u <string> | --user=<string>]  #  Only show a specified user.
[-?          | --help]           #  Print full usage description.
[-v          | --verbose]        #  Verbose output.

Examples

See also

Author

Martin Asser Hansen - Copyright (C) - All rights reserved.

[email protected]

June 2009

License

GNU General Public License version 2

http://www.gnu.org/copyleft/gpl.html

Help

biostat is part of the Biopieces framework.

http://www.biopieces.org

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