Support Modules

Description of PANOPLY Support Modules

The following links provide documentation on each PANOPLY Support Module:

• panoply_accumulate
• panoply_check_yaml_default
• panoply_cmap_annotate
• panoply_cna_setup
• panoply_download
• panoply_harmonize
• panoply_nmf_balance_omes
• panoply_nmf_assemble_results
• panoply_select_all_pairs
• panoply_unified_assemble_results

The following runtime parameters apply to each task, they can be changed but have the following defaults unless otherwise specified:

• memory: (Int, default = 2) number of GB of memory
• disk_space: (Int, default = 10) local disk SSD
• num_threads: (Int, default = 1) number of cpu threads
• num_preemptions: (Int, default = 0) number of preemptible attempts